STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRNL1Attractin like 1. (1382 aa)    
Predicted Functional Partners:
BAIAP2L1
BAI1 associated protein 2 like 1.
      
 0.646
PDZD8
PDZ domain-containing protein 8.
   
  
 0.634
PRIMA1
Uncharacterized protein.
      
 0.611
SOGA1
Suppressor of glucose, autophagy associated 1.
   
  
 0.579
COX18
Cytochrome c oxidase assembly factor COX18.
      
 0.579
RNF157
Ring finger protein 157.
   
 
 0.579
TSPYL2
Testis-specific Y-encoded-like protein 2; Belongs to the nucleosome assembly protein (NAP) family.
   
  
 0.578
MGRN1
Mahogunin ring finger 1.
   
 
 0.561
SORCS3
Sortilin related VPS10 domain containing receptor 3.
      
 0.547
ERC2
ELKS/RAB6-interacting/CAST family member 2.
      
 0.547
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.