STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM53BFamily with sequence similarity 53 member B. (430 aa)    
Predicted Functional Partners:
CNIH3
Cornichon family AMPA receptor auxiliary protein 3.
      
 0.786
CYFIP2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.649
DIP2C
Disco interacting protein 2 homolog C.
      
 0.570
GLO1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
      
 0.518
A0A5G2QBC0_PIG
Glyoxalase domain-containing protein.
      
 0.518
RUFY1
RUN and FYVE domain containing 1.
      
 0.516
ITPK1
Inositol-tetrakisphosphate 1-kinase.
      
 0.514
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H1.
      
 0.509
HNRNPH2
Heterogeneous nuclear ribonucleoprotein H2.
      
 0.509
RBM4B
RNA-binding protein 4B; Required for the translational activation of PER1 mRNA in response to circadian clock. Binds directly to the 3'-UTR of the PER1 mRNA (By similarity).
      
 0.501
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.