Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYPLAL1Lysophospholipase like 1. (259 aa)    
Predicted Functional Partners:
LARP6
La ribonucleoprotein domain family member 6.
      
 0.786
NRSN2
Neurensin 2.
      
 0.772
SLC30A8
Solute carrier family 30 member 8.
      
 0.721
ABHD13
Abhydrolase domain containing 13.
      
 0.699
NUP205
Nucleoporin 205.
      
 0.640
ABHD17A
Alpha/beta hydrolase domain-containing protein 17A isoform 2.
      
 0.639
HMGXB3
HMG-box containing 3.
      
 0.635
PLA2G4A
Phospholipase A2.
     
 0.629
SLC35D3
Solute carrier family 35 member D3.
      
 0.627
ABHD10
Abhydrolase domain containing 10.
   
  
 0.621
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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