STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT2Synaptotagmin 2. (417 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.940
VAMP2
V-SNARE coiled-coil homology domain-containing protein.
   
 0.908
VAMP1
V-SNARE coiled-coil homology domain-containing protein.
   
 
 0.856
STON2
Stonin-2; Adapter protein involved in endocytic machinery. Involved in the synaptic vesicle recycling. May facilitate clathrin-coated vesicle uncoating; Belongs to the Stoned B family.
   
 0.841
VAMP3
V-SNARE coiled-coil homology domain-containing protein.
   
 0.822
STX1A
Syntaxin 1A; Belongs to the syntaxin family.
   
 
 0.781
S100A13
S_100 domain-containing protein; Belongs to the S-100 family.
    
 
 0.779
STX4
Syntaxin 4; Belongs to the syntaxin family.
   
 
 0.774
CPLX1
Complexin 1.
   
 
 0.765
SYN1
Synapsin-1 isoform Ia.
   
 
 0.751
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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