STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WACWW domain containing adaptor with coiled-coil. (646 aa)    
Predicted Functional Partners:
RNF40
E3 ubiquitin protein ligase; Belongs to the BRE1 family.
   
 0.883
SCOC
Short coiled-coil protein.
      
 0.881
RNF20
E3 ubiquitin protein ligase; Belongs to the BRE1 family.
   
 0.867
RBM25
RNA binding motif protein 25.
   
 
 0.762
HS1BP3
HCLS1 binding protein 3.
      
 0.722
CDC5L
Cell division cycle 5-like protein.
   
 
 0.710
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.678
CNEP1R1
CTD nuclear envelope phosphatase 1 regulatory subunit 1.
      
 0.676
PRR3
Proline-rich protein 3.
    
 
 0.669
SF3B2
Splicing factor 3B subunit 2 isoform X1.
   
 
 0.658
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.