STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECHDC3Enoyl-CoA hydratase domain containing 3. (227 aa)    
Predicted Functional Partners:
PROSER2
Proline and serine rich 2.
      
 0.571
ECHDC2
Enoyl-CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.540
PECR
Peroxisomal trans-2-enoyl-CoA reductase.
   
  
 0.526
ECHDC1
Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.523
NUDT5
Nudix hydrolase 5; Belongs to the Nudix hydrolase family.
   
  
 0.521
CENPV
Centromere protein V.
      
 0.512
SLC5A12
Solute carrier family 5 member 12; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.510
GNPDA1
Glucosamine-6-phosphate isomerase.
      
 0.504
CDC123
Cell division cycle protein 123 homolog; Required for S phase entry of the cell cycle. Belongs to the CDC123 family.
      
 0.503
DHTKD1
Putative 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial.
      
 0.503
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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