Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSRNP1Cysteine/serine-rich nuclear protein 1 isoform b. (588 aa)    
Predicted Functional Partners:
IER5L
Immediate early response 5 like.
   
  
 0.707
NAV2
Neuron navigator 2.
      
 0.705
FAM78B
Family with sequence similarity 78 member B.
      
 0.703
FHIT
Fragile histidine triad diadenosine triphosphatase.
      
 0.640
SERGEF
Secretion regulating guanine nucleotide exchange factor.
      
 0.640
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.636
PPP1CB
Serine/threonine-protein phosphatase PP1-beta catalytic subunit; Protein phosphatase that associates with over 200 regulatory proteins to form highly specific holoenzymes which dephosphorylate hundreds of biological targets. Protein phosphatase (PP1) is essential for cell division, it participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Involved in regulation of ionic conductances and long-term synaptic plasticity. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progressi [...]
    
   0.616
MYO19
Myosin XIX; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.594
MAP3K20
Mitogen-activated protein kinase kinase kinase 20.
      
 0.592
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
   0.570
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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