Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCDC51Coiled-coil domain-containing protein 51 isoform 1. (421 aa)    
Predicted Functional Partners:
ABCB8
ATP binding cassette subfamily B member 8.
    
 0.878
ZNF541
Zinc finger protein 541.
      
 0.721
PUS1
Pseudouridine synthase 1.
   
  
 0.653
IDH3B
Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial; Plays a structural role to facilitate the assembly and ensure the full activity of the enzyme catalyzing the decarboxylation of isocitrate (ICT) into alpha-ketoglutarate. The heterodimer composed of the alpha (IDH3A) and beta (IDH3B) subunits and the heterodimer composed of the alpha (IDH3A) and gamma (IDH3G) subunits, have considerable basal activity but the full activity of the heterotetramer (containing two subunits of IDH3A, one of IDH3B and one of IDH3G) requires the assembly and cooperative function of both heterodimers.
      
 0.627
LRRC10
Leucine rich repeat containing 10.
      
 0.625
STXBP6
Syntaxin binding protein 6.
      
 0.623
NOVA2
NOVA alternative splicing regulator 2.
      
 0.594
ILVBL
IlvB acetolactate synthase like; Belongs to the TPP enzyme family.
      
 0.593
CCDC58
Coiled-coil domain containing 58.
      
 0.577
SF3B6
Splicing factor 3B subunit 6.
      
 0.573
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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