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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A20Mitochondrial carnitine/acylcarnitine carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (301 aa)    
Predicted Functional Partners:
SLC25A29
Solute carrier family 25 member 29; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 
0.900
APH1A
Aph-1 homolog A, gamma-secretase subunit.
 
    
 0.854
CPT2
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.735
CRAT
Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.733
CHAT
Choline O-acetyltransferase; Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.696
HSD17B4
Peroxisomal multifunctional enzyme type 2 isoform 2.
   
  
 0.674
ACADVL
Acyl-CoA dehydrogenase very long chain.
   
  
 0.652
APEH
Acylamino-acid-releasing enzyme; This enzyme catalyzes the hydrolysis of the N-terminal peptide bond of an N-acetylated peptide to generate an N-acetylated amino acid and a peptide with a free N-terminus. It preferentially cleaves off Ac-Ala, Ac-Met and Ac-Ser; Belongs to the peptidase S9C family.
   
  
 0.646
ACAA2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
  
 0.632
CPT1A
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.623
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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