STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P4HTMProlyl 4-hydroxylase, transmembrane. (496 aa)    
Predicted Functional Partners:
P4HA3
Prolyl 4-hydroxylase subunit alpha-3 isoform 1.
      
0.589
DPY19L1
Putative C-mannosyltransferase DPY19L1 isoform X1.
      
 0.572
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.555
ACAD11
Acyl-CoA dehydrogenase family member 11.
      
 0.534
NT5DC1
5'-nucleotidase domain containing 1.
      
 0.518
KTN1
Kinectin 1.
    
 
 0.506
AKAP6
A-kinase anchor protein 6 isoform X1.
      
 0.502
CCDC152
Coiled-coil domain containing 152.
      
 0.501
FBXW7
F-box and WD repeat domain containing 7.
      
 0.485
GPD1L
Glycerol-3-phosphate dehydrogenase [NAD(+)].
      
 0.482
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.