STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC71Coiled-coil domain-containing protein 71. (470 aa)    
Predicted Functional Partners:
TMEM158
Transmembrane protein 158 (gene/pseudogene).
      
 0.729
TMEM98
Transmembrane protein 98.
      
 0.729
PI15
Peptidase inhibitor 15; Belongs to the CRISP family.
      
 0.683
ARHGAP29
Rho GTPase-activating protein 29 isoform a.
      
 0.676
SYBU
Syntabulin.
      
 0.664
ART3
NAD(P)(+)--arginine ADP-ribosyltransferase.
      
 0.613
NSMAF
Neutral sphingomyelinase activation associated factor.
      
 0.554
FAM207A
Uncharacterized protein.
   
  
 0.541
EXOSC4
Exosome complex component RRP41.
   
  
 0.539
CD248
CD248 molecule.
      
 0.525
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.