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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR4Cadherin related family member 4. (785 aa)    
Predicted Functional Partners:
MON1A
Uncharacterized protein.
      
 0.712
IP6K1
Kinase; Belongs to the inositol phosphokinase (IPK) family.
 
    
 0.680
RNF123
Ring finger protein 123.
    
 
 0.679
KLHL3
Kelch like family member 3.
      
 0.667
MST1R
Macrophage stimulating 1 receptor.
   
 
 0.618
XKR4
XK-related protein.
      
 0.603
R3HDM1
R3H domain-containing protein 1 isoform X1.
      
 0.597
APOF
Apolipoprotein F.
      
 0.590
GPR50
G protein-coupled receptor 50; Belongs to the G-protein coupled receptor 1 family.
      
 0.558
GNA14
Guanine nucleotide-binding protein alpha 14.
      
 0.550
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.