STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFRD2Interferon-related developmental regulator 2. (441 aa)    
Predicted Functional Partners:
HBS1L
HBS1 like translational GTPase.
      
 0.900
SERBP1
Plasminogen activator inhibitor 1 RNA-binding protein isoform 1.
      
 0.866
CCDC124
Coiled-coil domain containing 124.
   
  
 0.844
OSBPL9
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.828
FAU
Ubiquitin-like protein FUBI.
    
   0.801
A0A287BBK4_PIG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.801
A0A5G2QQZ4_PIG
Ubiquitin-like domain-containing protein.
    
   0.801
RPL18A
60S ribosomal protein L18a.
    
 
 0.791
A0A286ZJ84_PIG
Uncharacterized protein.
    
 
 0.766
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
      
 0.757
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.