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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC1APOC1 centriolar protein A. (410 aa)    
Predicted Functional Partners:
CENPJ
Centromere protein J.
   
 
 0.737
DDIAS
DNA damage induced apoptosis suppressor.
   
 
 0.706
IQCF6
IQ motif containing F6.
      
 0.670
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 
 0.652
TUBG1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 
 0.652
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
   
 
 0.648
CENPW
Centromere protein W.
   
 
 0.646
CXXC1
CXXC finger protein 1.
   
 
 0.641
CETN1
Centrin 1.
    
 
 0.621
TMED6
Transmembrane emp24 domain-containing protein 6.
      
 0.611
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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