Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C3orf14Chromosome 3 open reading frame 14. (144 aa)    
Predicted Functional Partners:
CEP89
Centrosomal protein of 89 kDa isoform X1.
    
 
 0.843
C18orf54
Lung adenoma susceptibility protein 2 isoform X1.
      
 0.722
SCLT1
Sodium channel and clathrin linker 1.
      
 0.693
CCDC150
Coiled-coil domain containing 150.
      
 0.684
CEP83
Centrosomal protein of 83 kDa isoform X1.
      
 0.649
FBF1
Fas binding factor 1.
      
 0.649
RIBC2
RIB43A-like with coiled-coils protein 2.
    
 
 0.622
CCDC77
Coiled-coil domain-containing protein 77 isoform a.
      
 0.614
TTBK2
Tau tubulin kinase 2.
      
 0.578
LRRC45
Leucine rich repeat containing 45.
      
 0.577
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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