Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FEZF2FEZ family zinc finger 2. (503 aa)    
Predicted Functional Partners:
SATB2
DNA-binding protein SATB.
    
 
 0.870
TBR1
T-box brain transcription factor 1.
   
 
 0.824
CUX2
Homeobox protein cut-like.
    
 
 0.708
NEUROD6
Neurogenic differentiation factor.
   
 
 0.671
SLC17A7
Solute carrier family 17 member 7.
   
  
 0.632
LHX5
LIM/homeobox protein Lhx5.
   
 0.615
TLE4
TLE family member 4, transcriptional corepressor.
    
 
 0.613
NR2E3
Nuclear receptor subfamily 2 group E member 3.
   
 0.603
SOX5
SRY-box transcription factor 5.
    
 
 0.594
FOXG1
Forkhead box G1.
   
 
 0.590
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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