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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNTNSentan, cilia apical structure protein. (147 aa)    
Predicted Functional Partners:
CFAP58
Cilia-and flagella-associated protein 58.
      
 0.709
RSPH4A
Radial spoke head protein 4 homolog A isoform 1.
   
  
 0.675
FAM216B
Family with sequence similarity 216 member B.
   
  
 0.658
SHISA8
Shisa family member 8.
      
 0.658
FMO3
Dimethylaniline monooxygenase [N-oxide-forming].
      
 0.646
CHST13
Carbohydrate sulfotransferase.
      
 0.633
CCDC65
Coiled-coil domain containing 65.
      
 0.629
TRIM72
Tripartite motif-containing protein 72.
      
 0.608
SCGB3A2
Secretoglobin family 3A member 2.
   
  
 0.575
FOXJ1
Forkhead box J1.
      
 0.566
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.