STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMF1TATA element modulatory factor 1. (1096 aa)    
Predicted Functional Partners:
GOLGA4
Golgin A4.
   
 
 0.731
COG8
Uncharacterized protein.
     
 0.679
COG4
Conserved oligomeric Golgi complex subunit 4 isoform 1.
     
 0.674
RAB6A
RAB6A, member RAS oncogene family.
   
 0.666
MYNN
Myoneurin isoform X1.
   
  
 0.638
GCC1
GRIP and coiled-coil domain-containing protein 1.
     
 0.626
RAB6B
RAB6B, member RAS oncogene family.
    
 0.625
BAZ2B
Bromodomain adjacent to zinc finger domain 2B.
   
  
 0.622
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.622
KCNH6
Potassium voltage-gated channel subfamily H member 6.
      
 0.599
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.