SHQ1 protein (Sus scrofa) - STRING interaction network

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Score

SHQ1

SHQ1, H/ACA ribonucleoprotein assembly factor. (579 aa)

Predicted Functional Partners:

DKC1

0.997

GAR1

0.907

NOP10

0.878

FCHSD2

0.849

UBOX5

0.848

LONP2

0.847

PDZRN3

0.847

RANGRF

0.846

TRUB1

0.842

TRUB2

0.780

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DKC1	GAR1	ENSSSCP00000013633	ENSSSCP00000028209	Uncharacterized protein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.999
DKC1	NOP10	ENSSSCP00000013633	ENSSSCP00000051732	Uncharacterized protein.	NOP10 ribonucleoprotein.	0.999
DKC1	SHQ1	ENSSSCP00000013633	ENSSSCP00000012276	Uncharacterized protein.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.997
DKC1	TRUB1	ENSSSCP00000013633	ENSSSCP00000048348	Uncharacterized protein.	TruB pseudouridine synthase family member 1.	0.402
FCHSD2	LONP2	ENSSSCP00000053622	ENSSSCP00000003063	FCH and double SH3 domains 2.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	0.897
FCHSD2	PDZRN3	ENSSSCP00000053622	ENSSSCP00000065693	FCH and double SH3 domains 2.	PDZ domain containing ring finger 3.	0.896
FCHSD2	RANGRF	ENSSSCP00000053622	ENSSSCP00000049069	FCH and double SH3 domains 2.	Ran guanine nucleotide release factor isoform A.	0.896
FCHSD2	SHQ1	ENSSSCP00000053622	ENSSSCP00000012276	FCH and double SH3 domains 2.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.849
FCHSD2	UBOX5	ENSSSCP00000053622	ENSSSCP00000056934	FCH and double SH3 domains 2.	U-box domain containing 5.	0.897
GAR1	DKC1	ENSSSCP00000028209	ENSSSCP00000013633	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Uncharacterized protein.	0.999
GAR1	NOP10	ENSSSCP00000028209	ENSSSCP00000051732	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	NOP10 ribonucleoprotein.	0.998
GAR1	SHQ1	ENSSSCP00000028209	ENSSSCP00000012276	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.907
GAR1	TRUB1	ENSSSCP00000028209	ENSSSCP00000048348	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	TruB pseudouridine synthase family member 1.	0.923
GAR1	TRUB2	ENSSSCP00000028209	ENSSSCP00000050883	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Mitochondrial mRNA pseudouridine synthase TRUB2 isoform 1.	0.855
LONP2	FCHSD2	ENSSSCP00000003063	ENSSSCP00000053622	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	FCH and double SH3 domains 2.	0.897
LONP2	PDZRN3	ENSSSCP00000003063	ENSSSCP00000065693	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	PDZ domain containing ring finger 3.	0.898
LONP2	RANGRF	ENSSSCP00000003063	ENSSSCP00000049069	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	Ran guanine nucleotide release factor isoform A.	0.898
LONP2	SHQ1	ENSSSCP00000003063	ENSSSCP00000012276	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.847
LONP2	UBOX5	ENSSSCP00000003063	ENSSSCP00000056934	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import. May indirectly regulate peroxisomal fatty acid beta- oxidation through degradation of the self-processed forms of TYSND1.	U-box domain containing 5.	0.901
NOP10	DKC1	ENSSSCP00000051732	ENSSSCP00000013633	NOP10 ribonucleoprotein.	Uncharacterized protein.	0.999