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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRNT1tRNA nucleotidyl transferase 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (434 aa)    
Predicted Functional Partners:
THG1L
tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
   
  
 0.878
TRUB2
Mitochondrial mRNA pseudouridine synthase TRUB2 isoform 1.
  
  
 0.763
HARS2
Histidyl-tRNA synthetase 2, mitochondrial.
  
  
 0.742
PNPT1
Polyribonucleotide nucleotidyltransferase 1, mitochondrial.
  
 0.715
APMAP
Adipocyte plasma membrane associated protein.
  
 0.709
GTPBP10
GTP binding protein 10.
   
  
 0.697
TRIT1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
  
  
 0.694
ELAC2
Uncharacterized protein.
  
  
 0.690
HARS1
Histidyl-tRNA synthetase.
  
  
 0.689
PDE12
2',5'-phosphodiesterase 12 isoform 1.
      
 0.683
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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