Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TRNT1tRNA nucleotidyl transferase 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (434 aa)    
Predicted Functional Partners:
THG1L
tRNA(His) guanylyltransferase; Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.
   
  
 0.884
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 
 0.827
HARS2
Histidyl-tRNA synthetase 2, mitochondrial.
  
  
 0.760
MOGS
Mannosyl-oligosaccharide glucosidase isoform 1.
      
 0.739
HARS1
Histidyl-tRNA synthetase.
  
  
 0.738
ELAC2
Uncharacterized protein.
  
  
 0.700
TRUB2
Mitochondrial mRNA pseudouridine synthase TRUB2 isoform 1.
  
  
 0.696
TTI1
TELO2 interacting protein 1.
    
 
 0.690
EPSTI1
Epithelial-stromal interaction protein 1 isoform X1.
    
   0.685
PDE12
2',5'-phosphodiesterase 12 isoform 1.
      
 0.674
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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