STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATDN2Uncharacterized protein. (728 aa)    
Predicted Functional Partners:
PPP1R35
Protein phosphatase 1 regulatory subunit 35.
      
 0.778
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.778
GOLT1B
Uncharacterized protein.
  
  
 0.586
IRAK2
Interleukin-1 receptor-associated kinase-like 2.
    
 
 0.559
BAHD1
Bromo adjacent homology domain-containing 1 protein isoform X1.
   
  
 0.552
SUPV3L1
Suv3 like RNA helicase.
      
 0.502
MGAT4B
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
      
 0.489
SLC25A33
Solute carrier family 25 member 33; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.482
PMPCA
Peptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family.
     
 0.473
OIP5
Opa interacting protein 5.
      
 0.467
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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