Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IFT122Intraflagellar transport 122. (1215 aa)    
Predicted Functional Partners:
IFT140
Intraflagellar transport 140.
   
 0.999
IFT43
Uncharacterized protein.
    
 0.997
WDR19
WD repeat domain 19.
   
 0.997
WDR35
WD repeat-containing protein 35; As a component of the IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis and ciliary protein trafficking.
  
0.994
TTC21B
Tetratricopeptide repeat protein 21B.
   
 0.984
TULP3
TUB like protein 3; Belongs to the TUB family.
    
 0.975
C11orf74
Chromosome 11 open reading frame 74.
    
 
 0.955
IFT52
Intraflagellar transport protein 52 homolog isoform X1.
   
 0.945
IFT46
Intraflagellar transport 46.
    
 0.941
IFT81
Intraflagellar transport 81.
   
 0.939
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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