STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H1-8H1 histone family member O oocyte specific. (335 aa)    
Predicted Functional Partners:
H2AFZ
Histone H2A; Belongs to the histone H2A family.
   
 
 0.736
BMP15
Bone morphogenetic protein 15.
   
  
 0.692
H1-0
H1 histone family member 0.
    
 
 0.653
KPNB1
Karyopherin subunit beta 1.
    
   0.603
SEBOX
SEBOX homeobox.
      
 0.601
GDF9
Growth differentiation factor 9.
      
 0.596
KDM4B
Lysine demethylase 4B.
    
 
 0.583
A0A287A7T3_PIG
H15 domain-containing protein.
      
 0.573
DHX29
ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.
    
 
 0.557
WDR66
WD repeat domain 66.
    
 
 0.541
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.