close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD5FYVE, RhoGEF and PH domain-containing protein 5 isoform 1. (1499 aa)    
Predicted Functional Partners:
ECT2L
Epithelial cell transforming 2 like.
      
 0.656
ARHGEF15
Rho guanine nucleotide exchange factor 15.
   
  
 0.638
ARHGEF7
Rho guanine nucleotide exchange factor 7.
      
 0.581
ARHGEF38
Rho guanine nucleotide exchange factor 38.
      
 0.572
RBM19
RNA binding motif protein 19.
      
 0.570
ARHGEF16
Rho guanine nucleotide exchange factor 16.
   
  
 0.558
USHBP1
USH1 protein network component harmonin binding protein 1.
   
  
 0.539
DOCK9
Dedicator of cytokinesis 9; Belongs to the DOCK family.
    
 
 0.529
RHOJ
Uncharacterized protein.
    
 
 0.524
RBM45
RNA-binding protein 45 isoform X2.
      
 0.518
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.