Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM43Transmembrane protein 43. (399 aa)    
Predicted Functional Partners:
ENDOD1
Endonuclease domain containing 1.
    
 
 0.890
PKP2
Plakophilin 2.
      
 0.826
RNF26
E3 ubiquitin-protein ligase RNF26.
    
 
 0.792
KBTBD12
Kelch repeat and BTB domain-containing protein 12 isoform X1.
      
 0.771
FAF2
Fas associated factor family member 2.
   
 
 0.769
EMD
LEM domain-containing protein.
    
 
 0.769
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3; Belongs to the potassium channel family.
      
 0.764
PRR35
Proline rich 35.
      
 0.753
RPL14
60S ribosomal protein L14; Component of the large ribosomal subunit. Belongs to the eukaryotic ribosomal protein eL14 family.
    
   0.748
LOC100739087
Ribosomal_L14e domain-containing protein.
    
   0.748
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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