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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHCHD4Mitochondrial intermembrane space import and assembly protein 40 isoform 1. (138 aa)    
Predicted Functional Partners:
COX17
Cytochrome c oxidase copper chaperone; Copper metallochaperone essential for the assembly of the mitochondrial respiratory chain complex IV (CIV), also known as cytochrome c oxidase. Binds two copper ions and delivers them to the metallochaperone SCO1 which transports the copper ions to the Cu(A) site on the cytochrome c oxidase subunit II (MT-CO2/COX2).
   
 
 0.867
GFER
Sulfhydryl oxidase.
    
 
 0.798
SPRY3
Sprouty RTK signaling antagonist 3.
      
 0.787
GRIP2
Glutamate receptor interacting protein 2.
      
 0.769
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 
 0.759
TMLHE
Trimethyllysine dioxygenase, mitochondrial isoform 1.
      
 0.743
MYO3A
Protein kinase domain-containing protein.
      
 0.741
UROC1
Urocanate hydratase 1.
 
    
 0.740
SLC41A2
Solute carrier family 41 member 2.
      
 0.732
SLC6A6
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.730
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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