STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRA1Transmembrane protein adipocyte associated 1. (492 aa)    
Predicted Functional Partners:
TRPA1
Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.753
RSPRY1
RING finger and SPRY domain-containing protein 1 isoform 1.
      
 0.669
RCBTB1
RCC1 and BTB domain containing protein 1.
   
  
 0.660
IP6K2
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.654
GTF3C1
General transcription factor 3C polypeptide 1 isoform 1.
      
 0.649
RFFL
Uncharacterized protein.
      
 0.648
NUDT13
Nudix hydrolase 13.
      
 0.647
ZC3H15
Zinc finger CCCH-type containing 15.
      
 0.645
CCDC106
Coiled-coil domain containing 106.
      
 0.617
FBXO9
F-box domain-containing protein.
      
 0.591
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.