Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CHST13Carbohydrate sulfotransferase. (343 aa)    
Predicted Functional Partners:
CHST12
Carbohydrate sulfotransferase.
     
 0.920
CHST11
Carbohydrate sulfotransferase.
     
  0.919
CHST7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.787
ENTPD7
Ectonucleoside triphosphate diphosphohydrolase 7; Belongs to the GDA1/CD39 NTPase family.
      
 0.582
CSGALNACT2
Hexosyltransferase.
     
 0.580
SNTN
Sentan, cilia apical structure protein.
      
 0.580
B3GAT3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
     
 0.580
DEFB124
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.574
NDST2
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform 1.
   
  
 0.574
PLA2G2C
PA2c domain-containing protein.
      
 0.553
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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