Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSL2E3 ubiquitin-protein ligase MSL2 isoform 1. (577 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.996
MSL1
MSL complex subunit 1.
    
 0.996
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.987
DHX9
ATP-dependent RNA helicase A.
   
 
 0.798
RPS6KA5
Non-specific serine/threonine protein kinase.
    
 
 0.685
RPS6KA4
Ribosomal protein S6 kinase.
    
 
 0.685
LSM3
U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
  
 0.672
KAT5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 
 0.663
KAT7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 
 0.663
MORF4L1
Mortality factor 4-like protein 1 isoform 2.
    
 0.660
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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