STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLOD2Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2. (760 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.985
COLGALT1
Glycosyltransferase 25 domain containing 1.
   
0.969
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
  0.968
COLGALT2
Procollagen galactosyltransferase 2 isoform 1precursor.
   
0.965
SETD7
SET domain containing 7, histone lysine methyltransferase.
    
 0.926
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
  0.925
NSD3
Nuclear receptor binding SET domain protein 3.
    
 0.923
EZH1
Uncharacterized protein.
    
  0.921
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
  0.921
SETD2
SET domain containing 2, histone lysine methyltransferase.
    
  0.921
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.