STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKUB1Ankyrin repeat and ubiquitin domain containing 1. (543 aa)    
Predicted Functional Partners:
MAP3K19
Mitogen-activated protein kinase kinase kinase 19.
   
  
 0.520
TMEM255A
Transmembrane protein 255A.
      
 0.514
LRRC71
Leucine rich repeat containing 71.
      
 0.514
TCTEX1D1
Tctex1 domain-containing protein 1 isoform X1.
      
 0.513
FAM216B
Family with sequence similarity 216 member B.
      
 0.506
DAW1
WD_REPEATS_REGION domain-containing protein.
      
 0.504
CCDC114
Coiled-coil domain-containing protein 114 isoform X2.
      
 0.501
PARVG
Calponin-homology (CH) domain-containing protein.
      
 0.489
CFAP70
Cilia and flagella associated protein 70.
      
 0.487
COMMD2
COMM domain containing 2.
      
 0.487
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.