STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC39Coiled-coil domain-containing protein 39. (942 aa)    
Predicted Functional Partners:
CCDC40
Coiled-coil domain containing 40.
    
 
 0.896
RSPH9
Radial spoke head protein 9 homolog isoform 1.
    
 
 0.829
IFT122
Intraflagellar transport 122.
   
 
 0.815
A0A287BP21_PIG
Uncharacterized protein.
   
    0.790
RSPH4A
Radial spoke head protein 4 homolog A isoform 1.
   
 
 0.784
DNALI1
Dynein axonemal light intermediate chain 1.
    
 
 0.783
A0A5G2QHM0_PIG
Uncharacterized protein.
      
 0.781
DNAH5
Dynein axonemal heavy chain 5.
    
 
 0.780
DNAI1
Dynein axonemal intermediate chain 1.
   
  
 0.757
DNAH11
Dynein axonemal heavy chain 11.
    
 
 0.750
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.