STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL6B-cell lymphoma 6 protein isoform X1. (706 aa)    
Predicted Functional Partners:
ICOS
IGv domain-containing protein.
      
 0.959
IRF4
Interferon regulatory factor 4.
    
 
 0.954
NCOR2
Uncharacterized protein.
    
 
 0.952
CXCR5
C-X-C chemokine receptor type 5 isoform 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.933
AICDA
Activation induced cytidine deaminase.
      
 0.929
PAX5
Paired box 5.
    
 
 0.889
IL21R
Interleukin 21 receptor.
      
 0.880
FOXP3
Forkhead box protein P3 isoform a.
    
 
 0.849
CD40LG
CD40 ligand, membrane form; Cytokine that acts as a ligand to CD40/TNFRSF5 (By similarity). Costimulates T-cell proliferation and cytokine production (By similarity). Its cross-linking on T-cells generates a costimulatory signal which enhances the production of IL4 and IL10 in conjunction with the TCR/CD3 ligation and CD28 costimulation (By similarity). Induces the activation of NF-kappa-B (By similarity). Induces the activation of kinases MAPK8 and PAK2 in T-cells (By similarity). Mediates B-cell proliferation in the absence of co-stimulus as well as IgE production in the presence of [...]
      
 0.826
CD44
CD44 molecule (Indian blood group).
   
  
 0.822
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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