Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A4Uncharacterized protein. (212 aa)    
Predicted Functional Partners:
KCTD14
BTB domain-containing protein.
      
 0.820
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
      
 0.774
SLC8B1
Solute carrier family 8 member B1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
  
 
 0.718
RAB33A
RAB33A, member RAS oncogene family.
    
 
 0.667
VAMP5
Vesicle associated membrane protein 5.
    
 
 0.661
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
      
 0.640
LAMP5
Lysosomal associated membrane protein family member 5.
      
 0.632
DNAH14
Uncharacterized protein.
      
 0.624
UNCX
UNC homeobox.
      
 0.622
SLC24A1
Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
  
 
 0.611
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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