STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM44Transmembrane protein 44. (439 aa)    
Predicted Functional Partners:
LSG1
Large 60S subunit nuclear export GTPase 1.
   
  
 0.517
SNRNP48
U11/U12 small nuclear ribonucleoprotein 48 kDa protein.
      
 0.514
DPF3
Double PHD fingers 3.
      
 0.504
PPP1R18
Phostensin; May target protein phosphatase 1 to F-actin cytoskeleton.
      
 0.501
RUFY4
RUN and FYVE domain containing 4.
      
 0.497
DPYSL5
Dihydropyrimidinase-related protein 5 isoform X1.
      
 0.487
RASSF8
Ras association domain-containing protein 8 isoform X1.
      
 0.485
CITED4
Uncharacterized protein.
      
 0.483
NOP53
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
      
 0.469
SULT1C2
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.465
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.