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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100520273Poly [ADP-ribose] polymerase. (530 aa)    
Predicted Functional Partners:
PARP3
Poly [ADP-ribose] polymerase.
    
 
 0.678
PARP16
Poly [ADP-ribose] polymerase.
      
 0.671
PARP2
Poly [ADP-ribose] polymerase.
   
 
 0.618
PARP4
Poly [ADP-ribose] polymerase.
    
 
 0.601
PARP12
Poly(ADP-ribose) polymerase family member 12.
   
  
0.579
METTL6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
   
  
 0.578
CDC42SE2
CDC42 small effector 2.
      
 0.575
PARP9
Poly(ADP-ribose) polymerase family member 9.
  
 
0.566
IFIH1
Interferon induced with helicase C domain 1.
   
 
 0.565
I3LFU3_PIG
RING-type domain-containing protein.
   
 
 0.558
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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