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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDHHC23Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (428 aa)    
Predicted Functional Partners:
SULT6B1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.656
ARHGEF10L
Rho guanine nucleotide exchange factor 10 like.
      
 0.517
ARHGEF28
Rho guanine nucleotide exchange factor 28.
   
 
 0.509
SPTBN5
Spectrin beta, non-erythrocytic 5.
   
  
 0.505
SPTBN1
Spectrin beta chain; Belongs to the spectrin family.
   
  
 0.505
SESTD1
SEC14 and spectrin domain containing 1.
      
 0.478
SLC26A11
STAS domain-containing protein.
   
  
 0.475
TXNDC16
Thioredoxin domain containing 16.
    
 
 0.475
SGSH
N-sulfoglucosamine sulfohydrolase.
      
 0.446
PGAP1
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
   
  
 0.442
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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