STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB11Zinc finger and BTB domain containing 11. (1052 aa)    
Predicted Functional Partners:
DENR
Density-regulated protein; Belongs to the DENR family.
      
 0.565
UBTF
Upstream binding transcription factor.
    
 
 0.537
SNAPC1
Small nuclear RNA activating complex polypeptide 1.
      
 0.525
ANKRD27
Ankyrin repeat domain 27.
    
 
 0.519
A0A287AB88_PIG
Uncharacterized protein.
    
 
 0.519
CABIN1
Calcineurin binding protein 1.
    
 
 0.514
SSTR1
Somatostatin receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.499
PLXNA3
Plexin A3.
      
 0.497
MAP3K9
Mitogen-activated protein kinase kinase kinase.
    
 
 0.478
DEDD2
Death effector domain containing 2.
      
 0.469
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.