STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDND1Claudin domain containing 1. (336 aa)    
Predicted Functional Partners:
PDE4A
Phosphodiesterase.
      
 0.686
TATDN1
TatD DNase domain containing 1.
      
 0.662
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
      
 0.609
TTLL10
Tubulin tyrosine ligase like 10.
      
 0.608
OCEL1
Occludin/ELL domain containing 1.
      
 0.572
ZDHHC5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
   0.553
CDH20
Cadherin-20 preproprotein; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.524
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
      
 0.521
GPR182
G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.
      
 0.519
SLC49A4
Solute carrier family 49 member 4.
   
  
 0.507
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.