STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CADM2Cell adhesion molecule 2. (438 aa)    
Predicted Functional Partners:
KCNS1
Potassium voltage-gated channel modifier subfamily S member 1; Belongs to the potassium channel family.
      
 0.777
TTC36
Tetratricopeptide repeat domain 36.
      
 0.761
TMEM25
Transmembrane protein 25.
      
 0.761
ACSBG2
Acyl-CoA synthetase bubblegum family member 2.
   
  
 0.750
FANK1
Fibronectin type III and ankyrin repeat domains 1.
      
 0.739
MYRIP
Myosin VIIA and Rab interacting protein.
   
  
 0.728
CALY
Calcyon neuron specific vesicular protein.
   
  
 0.722
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.721
BRINP2
BMP/retinoic acid inducible neural specific 2.
   
  
 0.713
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
      
 0.692
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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