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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHODLChondrolectin. (272 aa)    
Predicted Functional Partners:
VSTM2B
V-set and transmembrane domain-containing protein 2B isoform X1.
      
 0.580
GADL1
Glutamate decarboxylase like 1.
      
 0.573
LAMP5
Lysosomal associated membrane protein family member 5.
      
 0.571
OSBPL10
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.571
LRRC42
Leucine-rich repeat-containing protein 42.
      
 0.558
SLCO3A1
Solute carrier organic anion transporter family member.
      
 0.518
KLHL25
Kelch like family member 25.
      
 0.516
RNF152
E3 ubiquitin-protein ligase RNF152 isoform X1.
      
 0.516
CCDC3
Coiled-coil domain containing 3.
      
 0.509
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
      
 0.506
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.