STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN8Gem nuclear organelle associated protein 8. (239 aa)    
Predicted Functional Partners:
GEMIN7
Gem nuclear organelle associated protein 7.
    
 0.999
GEMIN5
Gem nuclear organelle associated protein 5.
    
 0.984
DDX20
Putative ATP-dependent RNA helicase DDX20 isoform X1.
    
 0.977
GEMIN4
Gem nuclear organelle associated protein 4.
    
 0.975
GEMIN2
Gem nuclear organelle associated protein 2.
    
 0.950
SMN1
Tudor domain-containing protein.
    
 0.939
TCEANC
Transcription elongation factor A N-terminal and central domain containing.
   
  
 0.895
GEMIN6
Gem nuclear organelle associated protein 6.
     
 0.854
TOE1
Target of EGR1, exonuclease.
      
 0.827
STRAP
Serine-threonine kinase receptor-associated protein.
    
 0.819
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.