Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GEMIN8Gem nuclear organelle associated protein 8. (239 aa)    
Predicted Functional Partners:
GEMIN7
Gem nuclear organelle associated protein 7.
   
 0.998
GEMIN2
Gem nuclear organelle associated protein 2.
    
 0.997
DDX20
Putative ATP-dependent RNA helicase DDX20 isoform X1.
    
 0.995
GEMIN5
Gem nuclear organelle associated protein 5.
    
 0.994
GEMIN4
Gem nuclear organelle associated protein 4.
    
 0.993
STRAP
Serine-threonine kinase receptor-associated protein.
    
 0.993
GEMIN6
Gem nuclear organelle associated protein 6.
     
 0.934
SNRPE
Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development.
    
 0.923
TCEANC
Transcription elongation factor A N-terminal and central domain containing.
   
  
 0.908
SNRPF
Sm domain-containing protein.
    
 0.894
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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