Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
F1SPW0_PIGWD_REPEATS_REGION domain-containing protein. (604 aa)    
Predicted Functional Partners:
DDA1
DET1 and DDB1 associated 1.
    
 0.960
DCAF4
WD_REPEATS_REGION domain-containing protein.
     
 0.934
DCAF11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
 0.922
DCAF16
DDB1 and CUL4 associated factor 16.
    
 0.922
DCAF12L2
DDB1 and CUL4 associated factor 12 like 2.
     
 0.920
DCAF5
DDB1 and CUL4 associated factor 5.
     
0.916
DCAF1
DDB1 and CUL4 associated factor 1.
     
 0.915
DCAF6
DDB1-and CUL4-associated factor 6 isoform c.
    
0.912
AMBRA1
Activating molecule in BECN1-regulated autophagy protein 1 isoform X1.
    
 0.907
WDTC1
WD and tetratricopeptide repeats 1.
    
0.907
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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