STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSPT2G1 to S phase transition 2. (750 aa)    
Predicted Functional Partners:
ETF1
Eukaryotic peptide chain release factor subunit 1 isoform 1.
   
 0.996
PAPSS2
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 isoform b.
 
  
   0.903
GSPT1
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform 1.
  
  
0.902
PAPSS1
3'-phosphoadenosine 5'-phosphosulfate synthase 1.
 
  
   0.897
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.888
EPRS1
Glutamyl-prolyl-tRNA synthetase.
   
   0.846
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.834
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.822
A0A287BBK4_PIG
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.806
FAU
Ubiquitin-like protein FUBI.
    
 
 0.803
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.