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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1S1P4_PIGPC4 domain-containing protein. (120 aa)    
Predicted Functional Partners:
SYMPK
Symplekin.
    
 
 0.728
ARL6IP4
ADP ribosylation factor like GTPase 6 interacting protein 4.
      
 0.515
ZC3H8
Zinc finger CCCH-type containing 8.
      
 0.501
THRAP3
Thyroid hormone receptor-associated protein 3 isoform 1.
   
  
 0.479
XRN1
5'-3' exoribonuclease 1.
      
 0.474
HSPA14
Heat shock protein family A (Hsp70) member 14; Belongs to the heat shock protein 70 family.
   
  
 0.429
POMP
Proteasome maturation protein.
   
  
 0.423
TMA7
Translation machinery associated 7 homolog.
   
    0.412
A0A5G2QGQ9_PIG
Uncharacterized protein.
   
    0.412
GTF2B
General transcription factor IIB.
   
 
 0.404
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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