STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RADXRPA1 related single stranded DNA binding protein, X-linked. (857 aa)    
Predicted Functional Partners:
ZRANB3
Zinc finger RANBP2-type containing 3.
      
 0.514
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
      
 0.514
TDP2
Endo/exonuclease/phosphatase domain-containing protein.
      
 0.491
MUS81
MUS81 structure-specific endonuclease subunit.
      
 0.465
DNA2
DNA replication helicase/nuclease 2.
      
 0.445
HLTF
Helicase like transcription factor.
   
  
 0.411
A0A287B8J8_PIG
Uncharacterized protein.
  
   
 0.407
CARMIL2
Capping protein regulator and myosin 1 linker 2.
      
 0.400
GPS1
G protein pathway suppressor 1.
      
 0.400
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.