STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONRF3LON peptidase N-terminal domain and ring finger 3. (840 aa)    
Predicted Functional Partners:
MST1R
Macrophage stimulating 1 receptor.
    
 
 0.590
SMARCD3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3.
      
 0.587
PNMA5
PNMA family member 5.
   
  
 0.582
SLMAP
Sarcolemmal membrane-associated protein isoform X2.
   
 
 0.528
MTMR8
Myotubularin-related protein 8.
   
  
 0.517
SHANK3
SH3 and multiple ankyrin repeat domains 3.
   
  
 0.517
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
      
 0.514
PDZRN4
PDZ domain containing ring finger 4.
      
 0.513
SMIM26
Small integral membrane protein 26.
      
 0.506
CCDC71L
Uncharacterized protein.
      
 0.506
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.