STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNCKProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (426 aa)    
Predicted Functional Partners:
DCX
Doublecortin.
 
  
 
 0.898
HAUS7
HAUS augmin like complex subunit 7.
      
 0.896
TEX28
Testis expressed 28.
      
 0.896
NAA10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
      
 0.708
TMCC1
Uncharacterized protein.
      
 0.605
NAA11
N(alpha)-acetyltransferase 11, NatA catalytic subunit.
      
 0.572
RAB3IL1
RAB3A interacting protein like 1.
    
 
 0.538
ANKRD37
Ankyrin repeat domain 37.
   
 
 0.523
PDZD11
PDZ domain-containing protein 11; Mediates docking of ADAM10 to zonula adherens by interacting with PLEKHA7 which is required for PLEKHA7 to interact with the ADAM10- binding protein TSPAN33.
   
 
 0.502
SPOCK3
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3.
   
  
 0.446
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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