STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAP1L4Nucleosome assembly protein 1 like 4; Belongs to the nucleosome assembly protein (NAP) family. (419 aa)    
Predicted Functional Partners:
SLC22A18
Solute carrier family 22 member 18.
      
 0.704
LRWD1
Leucine rich repeats and WD repeat domain containing 1.
   
  
 0.672
TSSC4
Tumor suppressing subtransferable candidate 4.
      
 0.660
OSBPL5
Oxysterol-binding protein; Belongs to the OSBP family.
 
    
 0.655
H2AFZ
Histone H2A; Belongs to the histone H2A family.
   
 
 0.603
H2AZ2
Histone H2A; Belongs to the histone H2A family.
   
 
 0.603
A0A5G2RG45_PIG
Histone H2A; Belongs to the histone H2A family.
   
 
 0.603
VAPB
Vesicle-associated membrane protein-associated protein B; Participates in the endoplasmic reticulum unfolded protein response (UPR) by inducing ERN1/IRE1 activity. Involved in cellular calcium homeostasis regulation.
   
  
 0.589
TSPYL2
Testis-specific Y-encoded-like protein 2; Belongs to the nucleosome assembly protein (NAP) family.
   
 
 0.586
PCDH18
Protocadherin 18.
   
  
 0.584
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.