close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTO1Oral cancer-overexpressed protein 1. (137 aa)    
Predicted Functional Partners:
YAE1
YAE1 maturation factor of ABCE1.
   
 
 0.972
ABCE1
ATP binding cassette subfamily E member 1.
    
 
 0.851
FGF19
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.648
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 
 0.633
IBA57
Uncharacterized protein.
      
 0.606
FGF3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.590
PPFIA1
PTPRF interacting protein alpha 1.
      
 0.570
FGF4
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
      
 0.559
STX17
Syntaxin-17 isoform X1; Belongs to the syntaxin family.
      
 0.557
SOX5
SRY-box transcription factor 5.
      
 0.545
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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